HLA-DRB1 expression based on
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Statistics: Unpaired two sample T-test was employed to evaluate levels of significance in expression level between any two sample groups
Comparison Statistical significance
Normal-vs-Primary 1.320360E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Cancer stage information is not available for 3 samples.
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Comparison
Statistical significance
Normal-vs-Stage1
9.934300E-02
Normal-vs-Stage2
1.877210E-01
Normal-vs-Stage3
2.848300E-02
Normal-vs-Stage4
2.333600E-02
Stage1-vs-Stage2
2.736300E-03
Stage1-vs-Stage3
7.579400E-01
Stage1-vs-Stage4
6.537000E-01
Stage2-vs-Stage3
2.777000E-01
Stage2-vs-Stage4
2.567200E-01
Stage3-vs-Stage4
9.361200E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Patient race information is not available for 5 samples.
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Comparison
Statistical significance
Normal-vs-Caucasian
1.427600E-01
Normal-vs-AfricanAmerican
4.642400E-01
Normal-vs-Asian
2.614000E-02
Caucasian-vs-AfricanAmerican
3.605600E-01
Caucasian-vs-Asian
3.849800E-01
AfricanAmerican-vs-Asian
1.152360E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Patient gender information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Male
9.905500E-02
Normal-vs-Female
1.931560E-01
Male-vs-Female
1.670440E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Patient age information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Age(21-40Yrs)
5.440200E-02
Normal-vs-Age(41-60Yrs)
9.753600E-02
Normal-vs-Age(61-80Yrs)
1.215390E-01
Normal-vs-Age(81-100Yrs)
5.499200E-01
Age(21-40Yrs)-vs-Age(41-60Yrs)
4.878800E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
5.768200E-01
Age(21-40Yrs)-vs-Age(81-100Yrs)
5.314600E-01
Age(41-60Yrs)-vs-Age(61-80Yrs)
8.302600E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
5.927800E-01
Age(61-80Yrs)-vs-Age(81-100Yrs)
5.445400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Drinking status is not available for 80 samples.
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Comparison
Statistical significance
Normal-vs-Non Drinker
7.016100E-03
Normal-vs-Daily Drinker
2.983800E-02
Normal-vs-Weekly Drinker
3.344200E-01
Normal-vs-Occasional Drinker
1.619230E-01
Normal-vs-Social Drinker
1.884300E-02
Non Drinker-vs-Daily Drinker
4.595600E-01
Non Drinker-vs-Weekly Drinker
2.164200E-01
Non Drinker-vs-Occasional Drinker
6.309800E-01
Non Drinker-vs-Social Drinker
4.715400E-01
Daily Drinker-vs-Weekly Drinker
4.136800E-01
Daily Drinker-vs-Occasional Drinker
9.950400E-01
Daily Drinker-vs-Social Drinker
9.876200E-01
Weekly Drinker-vs-Occasional Drinker
4.881600E-01
Weekly Drinker-vs-Social Drinker
4.199600E-01
Occasional Drinker-vs-Social Drinker
9.961200E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma
Subtype descriptions
Grade 1 Well differentiated (low grade)
Grade 2 Moderately differentiated (intermediate grade)
Grade 3 Poorly differentiated (high grade)
Grade 4 Undifferentiated (high grade)
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Comparison
Statistical significance
Normal-vs-Grade 1
6.968200E-01
Normal-vs-Grade 2
6.791600E-01
Normal-vs-Grade 3
8.356200E-01
Normal-vs-Grade 4
1.000000E+00
Grade 1-vs-Grade 2
6.422200E-03
Grade 1-vs-Grade 3
8.509700E-02
Grade 1-vs-Grade 4
6.968200E-01
Grade 2-vs-Grade 3
5.620000E-01
Grade 2-vs-Grade 4
6.791600E-01
Grade 3-vs-Grade 4
8.356200E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Diabetes status information is not available for 30 samples.
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Comparison
Statistical significance
Normal-vs-Diabetic
1.634640E-01
Normal-vs-NonDiabetic
3.627800E-02
Diabetic-vs-NonDiabetic
3.589400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Pancreatitis status is not available for 39 samples.
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Comparison
Statistical significance
Normal-vs-Pancreatitis
5.601500E-02
Normal-vs-NoPancreatitis
7.061600E-02
Pancreatitis-vs-NoPancreatitis
9.480200E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Nodal metastais status is not available for 1 sample and cancer in nearby lymph nodes cannot be measured (NX) in 4 samples.
pathologic_N descriptions
N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes
N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison
Statistical significance
Normal-vs-N0
4.711500E-02
Normal-vs-N1
1.989820E-01
N0-vs-N1
1.647220E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Whole exome sequencing data is not available for 3 samples.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison
Statistical significance
Normal-vs-TP53-Mutant
2.593600E-01
Normal-vs-TP53-NonMutant
1.718410E-01
TP53-Mutant-vs-TP53-NonMutant
6.821000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap