DEPDC4 expression based on
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Comparison Statistical significance Normal-vs-Primary 4.217600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Cancer stage information is not available for 3 samples.
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Comparison Statistical significance
Normal-vs-Stage1
6.115800E-02
Normal-vs-Stage2
3.955600E-01
Normal-vs-Stage3
5.434600E-01
Normal-vs-Stage4
5.057800E-01
Stage1-vs-Stage2
1.215440E-03
Stage1-vs-Stage3
9.284100E-02
Stage1-vs-Stage4
1.167960E-01
Stage2-vs-Stage3
8.104000E-01
Stage2-vs-Stage4
9.381400E-01
Stage3-vs-Stage4
9.075600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Patient race information is not available for 5 samples.
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Comparison Statistical significance
Normal-vs-Caucasian
4.064600E-01
Normal-vs-AfricanAmerican
1.688430E-01
Normal-vs-Asian
8.898400E-01
Caucasian-vs-AfricanAmerican
4.889200E-01
Caucasian-vs-Asian
3.098100E-02
AfricanAmerican-vs-Asian
2.166400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Patient gender information is not available for 1 sample.
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Comparison Statistical significance
Normal-vs-Male
4.487800E-01
Normal-vs-Female
4.061600E-01
Male-vs-Female
6.052400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Patient age information is not available for 1 sample.
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Comparison Statistical significance
Normal-vs-Age(21-40Yrs)
1.401580E-01
Normal-vs-Age(41-60Yrs)
3.669000E-01
Normal-vs-Age(61-80Yrs)
4.927800E-01
Normal-vs-Age(81-100Yrs)
3.880200E-01
Age(21-40Yrs)-vs-Age(41-60Yrs)
6.295600E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
4.235200E-01
Age(21-40Yrs)-vs-Age(81-100Yrs)
7.404000E-01
Age(41-60Yrs)-vs-Age(61-80Yrs)
3.297000E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
8.623800E-01
Age(61-80Yrs)-vs-Age(81-100Yrs)
4.689400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Drinking status is not available for 80 samples.
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Comparison Statistical significance
Normal-vs-Non Drinker
3.279800E-01
Normal-vs-Daily Drinker
7.900200E-01
Normal-vs-Weekly Drinker
7.819200E-01
Normal-vs-Occasional Drinker
3.024800E-01
Normal-vs-Social Drinker
2.742000E-01
Non Drinker-vs-Daily Drinker
1.550450E-02
Non Drinker-vs-Weekly Drinker
1.793150E-01
Non Drinker-vs-Occasional Drinker
9.752200E-01
Non Drinker-vs-Social Drinker
3.511000E-01
Daily Drinker-vs-Weekly Drinker
7.409800E-01
Daily Drinker-vs-Occasional Drinker
3.894200E-02
Daily Drinker-vs-Social Drinker
3.283600E-02
Weekly Drinker-vs-Occasional Drinker
2.024800E-01
Weekly Drinker-vs-Social Drinker
8.760200E-02
Occasional Drinker-vs-Social Drinker
3.880600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
Subtype descriptions Grade 1 Well differentiated (low grade)
Grade 2 Moderately differentiated (intermediate grade) Grade 3 Poorly differentiated (high grade)
Grade 4 Undifferentiated (high grade)
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Comparison Statistical significance
Normal-vs-Grade 1
3.295000E-01
Normal-vs-Grade 2
2.220200E-01
Normal-vs-Grade 3
1.314750E-01
Normal-vs-Grade 4
1.000000E+00
Grade 1-vs-Grade 2
1.238040E-01
Grade 1-vs-Grade 3
5.853200E-01
Grade 1-vs-Grade 4
3.295000E-01
Grade 2-vs-Grade 3
3.877800E-02
Grade 2-vs-Grade 4
2.220200E-01
Grade 3-vs-Grade 4
1.314750E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Diabetes status information is not available for 30 samples.
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Comparison Statistical significance
Normal-vs-Diabetic
3.367600E-01
Normal-vs-NonDiabetic
5.092200E-01
Diabetic-vs-NonDiabetic
8.787800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Pancreatitis status is not available for 39 samples.
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Comparison Statistical significance
Normal-vs-Pancreatitis
5.760600E-01
Normal-vs-NoPancreatitis
4.713400E-01
Pancreatitis-vs-NoPancreatitis
5.104400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Nodal metastais status is not available for 1 sample and cancer in nearby lymph nodes cannot be measured (NX) in 4 samples.
pathologic_N descriptions N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison Statistical significance
Normal-vs-N0
4.752000E-01
Normal-vs-N1
3.810800E-01
N0-vs-N1
4.770800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
*
Please note that low number(<10) of normal samples considered.
Note
Whole exome sequencing data is not available for 3 samples.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison Statistical significance
Normal-vs-TP53-Mutant
4.622400E-01
Normal-vs-TP53-NonMutant
1.138370E-02
TP53-Mutant-vs-TP53-NonMutant
1.890010E-02
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
