COBRA1 expression based on
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Statistics: Unpaired two sample T-test was employed to evaluate levels of significance in expression level between any two sample groups
Comparison Statistical significance Normal-vs-Primary 9.345000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Cancer stage information is not available for 3 samples.
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Comparison Statistical significance
Normal-vs-Stage1
2.078600E-01
Normal-vs-Stage2
9.239400E-01
Normal-vs-Stage3
3.207600E-01
Normal-vs-Stage4
9.678200E-01
Stage1-vs-Stage2
2.116600E-01
Stage1-vs-Stage3
5.242600E-01
Stage1-vs-Stage4
1.452840E-01
Stage2-vs-Stage3
8.406200E-02
Stage2-vs-Stage4
9.296000E-01
Stage3-vs-Stage4
2.388000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Patient race information is not available for 5 samples.
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Comparison Statistical significance
Normal-vs-Caucasian
9.379600E-01
Normal-vs-AfricanAmerican
4.958000E-01
Normal-vs-Asian
3.757400E-01
Caucasian-vs-AfricanAmerican
4.713400E-01
Caucasian-vs-Asian
1.751620E-01
AfricanAmerican-vs-Asian
5.938100E-02
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Patient gender information is not available for 1 sample.
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Comparison Statistical significance
Normal-vs-Male
9.192200E-01
Normal-vs-Female
9.634400E-01
Male-vs-Female
8.862600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Patient age information is not available for 1 sample.
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Comparison Statistical significance
Normal-vs-Age(21-40Yrs)
1.318430E-01
Normal-vs-Age(41-60Yrs)
6.350800E-01
Normal-vs-Age(61-80Yrs)
8.811200E-01
Normal-vs-Age(81-100Yrs)
7.165200E-01
Age(21-40Yrs)-vs-Age(41-60Yrs)
2.279400E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
5.428800E-01
Age(21-40Yrs)-vs-Age(81-100Yrs)
2.085200E-01
Age(41-60Yrs)-vs-Age(61-80Yrs)
2.702000E-02
Age(41-60Yrs)-vs-Age(81-100Yrs)
7.271400E-01
Age(61-80Yrs)-vs-Age(81-100Yrs)
3.831000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Drinking status is not available for 80 samples.
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Comparison Statistical significance
Normal-vs-Non Drinker
8.203400E-01
Normal-vs-Daily Drinker
5.604800E-01
Normal-vs-Weekly Drinker
6.299400E-01
Normal-vs-Occasional Drinker
5.231400E-01
Normal-vs-Social Drinker
7.281200E-01
Non Drinker-vs-Daily Drinker
9.186100E-02
Non Drinker-vs-Weekly Drinker
2.411800E-01
Non Drinker-vs-Occasional Drinker
6.453800E-02
Non Drinker-vs-Social Drinker
2.654800E-01
Daily Drinker-vs-Weekly Drinker
6.870800E-01
Daily Drinker-vs-Occasional Drinker
6.781200E-01
Daily Drinker-vs-Social Drinker
7.612800E-01
Weekly Drinker-vs-Occasional Drinker
4.811800E-01
Weekly Drinker-vs-Social Drinker
9.602400E-01
Occasional Drinker-vs-Social Drinker
5.493800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma
Subtype descriptions Grade 1 Well differentiated (low grade)
Grade 2 Moderately differentiated (intermediate grade) Grade 3 Poorly differentiated (high grade)
Grade 4 Undifferentiated (high grade)
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Comparison Statistical significance
Normal-vs-Grade 1
7.914800E-01
Normal-vs-Grade 2
8.664200E-01
Normal-vs-Grade 3
7.942600E-01
Normal-vs-Grade 4
1.000000E+00
Grade 1-vs-Grade 2
5.165200E-01
Grade 1-vs-Grade 3
1.356390E-01
Grade 1-vs-Grade 4
7.914800E-01
Grade 2-vs-Grade 3
1.039560E-01
Grade 2-vs-Grade 4
8.664200E-01
Grade 3-vs-Grade 4
7.942600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Diabetes status information is not available for 30 samples.
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Comparison Statistical significance
Normal-vs-Diabetic
9.175200E-01
Normal-vs-NonDiabetic
7.109400E-01
Diabetic-vs-NonDiabetic
1.398600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Pancreatitis status is not available for 39 samples.
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Comparison Statistical significance
Normal-vs-Pancreatitis
3.896800E-01
Normal-vs-NoPancreatitis
8.588800E-01
Pancreatitis-vs-NoPancreatitis
1.361240E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Nodal metastais status is not available for 1 sample and cancer in nearby lymph nodes cannot be measured (NX) in 4 samples.
pathologic_N descriptions N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison Statistical significance
Normal-vs-N0
8.418400E-01
Normal-vs-N1
9.723600E-01
N0-vs-N1
5.922000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
PAAD : Pancreatic adenocarcinoma *
Please note that low number(<10) of normal samples considered.
Note
Whole exome sequencing data is not available for 3 samples.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison Statistical significance
Normal-vs-TP53-Mutant
6.795200E-01
Normal-vs-TP53-NonMutant
6.926800E-01
TP53-Mutant-vs-TP53-NonMutant
7.461300E-03
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
