MCART2 expression profile based on
LGG : Brain lower grade glioma *
Please note that the TPM values for gene considered is extremely low (TPM < 1).
Note
Patient race information is not available for 12 samples and 1 sample is from American Indian.
Statistics: Unpaired two sample T-test was employed to evaluate levels of significance in expression level between any two sample groups
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Comparison Statistical significance
Caucasian-vs-AfricanAmerican
6.697000E-01
Caucasian-vs-Asian
9.506200E-01
AfricanAmerican-vs-Asian
8.621400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
LGG : Brain lower grade glioma Note
Patient gender information is not available for 2 samples.
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Comparison Statistical significance
Male-vs-Female
9.048800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
LGG : Brain lower grade glioma Note
Patient age information is not available for 2 samples.
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Comparison Statistical significance
Age(21-40Yrs)-vs-Age(41-60Yrs)
2.861000E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
2.876400E-01
Age(21-40Yrs)-vs-Age(81-100Yrs)
N/A
Age(41-60Yrs)-vs-Age(61-80Yrs)
7.613200E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
N/A
Age(61-80Yrs)-vs-Age(81-100Yrs)
N/A
Pan-cancer view
Methylation
Survival
Correlated genes
LGG : Brain lower grade glioma Note
Tumor grade information is not available for 3 samples.
Subtype descriptions Grade 1 Well differentiated (low grade)
Grade 2 Moderately differentiated (intermediate grade) Grade 3 Poorly differentiated (high grade)
Grade 4 Undifferentiated (high grade)
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Comparison Statistical significance
Grade 2-vs-Grade 3
1.406790E-01
Pan-cancer view
Methylation
Survival
Correlated genes
LGG : Brain lower grade glioma Note
Histological subtype information is not available for 1 sample.
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Comparison Statistical significance
Astrocytoma-vs-Oligoastrocytoma
7.226200E-01
Astrocytoma-vs-Oligodendroglioma
8.188000E-01
Oligoastrocytoma-vs-Oligodendroglioma
8.630200E-01
Pan-cancer view
Methylation
Survival
Correlated genes
LGG : Brain lower grade glioma Note
Whole exome sequencing data is not available for 4 samples.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data.
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Comparison Statistical significance
TP53-Mutant-vs-TP53-NonMutant
6.359700E-02
Pan-cancer view
Methylation
Survival
Correlated genes
