VPS54 expression based on
KICH : Kidney chromophobe
Comparison Statistical significance
Normal-vs-Primary 2.856399561324E-10
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer stage information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Stage1
4.47400000047615E-07
Normal-vs-Stage2
1.15649999998801E-06
Normal-vs-Stage3
1.562520E-03
Normal-vs-Stage4
9.796900E-03
Stage1-vs-Stage2
7.242200E-01
Stage1-vs-Stage3
7.195000E-01
Stage1-vs-Stage4
4.038600E-01
Stage2-vs-Stage3
9.405400E-01
Stage2-vs-Stage4
3.548400E-01
Stage3-vs-Stage4
4.327400E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient race information is not available for 3 samples.
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Comparison
Statistical significance
Normal-vs-Caucasian
3.52759998989427E-09
Normal-vs-AfricanAmerican
3.993300E-04
Normal-vs-Asian
2.484600E-03
Caucasian-vs-AfricanAmerican
8.887800E-01
Caucasian-vs-Asian
7.237000E-01
AfricanAmerican-vs-Asian
6.496000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient gender information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Male
3.57679999951621E-07
Normal-vs-Female
3.65379999589521E-08
Male-vs-Female
5.689800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient age information is not available for 1 sample and one sample from patient below 21 years not considered in above plot.
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Comparison
Statistical significance
Normal-vs-Age(21-40Yrs)
1.97049998540422E-09
Normal-vs-Age(41-60Yrs)
2.5031999806302E-09
Normal-vs-Age(61-80Yrs)
2.602400E-02
Normal-vs-Age(81-100Yrs)
N/A
Age(21-40Yrs)-vs-Age(41-60Yrs)
2.563000E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
4.299900E-02
Age(21-40Yrs)-vs-Age(81-100Yrs)
N/A
Age(41-60Yrs)-vs-Age(61-80Yrs)
2.148800E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
N/A
Age(61-80Yrs)-vs-Age(81-100Yrs)
N/A
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer in nearby lymph nodes cannot be measured (NX) in 21 samples.
pathologic_N descriptions
N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes
N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison
Statistical significance
Normal-vs-N0
1.51540000548067E-08
Normal-vs-N1
6.255000E-01
Normal-vs-N2
2.857200E-03
N0-vs-N1
2.137400E-01
N0-vs-N2
8.922400E-01
N1-vs-N2
4.552200E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe
Note
Whole exome sequencing data is not available for 1 sample.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison
Statistical significance
Normal-vs-TP53-Mutant
2.03159711276157E-11
Normal-vs-TP53-NonMutant
1.94259999974911E-07
TP53-Mutant-vs-TP53-NonMutant
7.426400E-02
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap