VPS28 expression based on
KICH : Kidney chromophobe
Comparison Statistical significance Normal-vs-Primary 2.59348098552437E-13
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer stage information is not available for 1 sample.
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Comparison Statistical significance
Normal-vs-Stage1
4.98639999957362E-07
Normal-vs-Stage2
1.0389000004718E-07
Normal-vs-Stage3
5.3213000672514E-10
Normal-vs-Stage4
7.085000E-01
Stage1-vs-Stage2
6.125400E-01
Stage1-vs-Stage3
8.331400E-01
Stage1-vs-Stage4
2.421500E-02
Stage2-vs-Stage3
4.719400E-01
Stage2-vs-Stage4
3.103600E-02
Stage3-vs-Stage4
1.046410E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient race information is not available for 3 samples.
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Comparison Statistical significance
Normal-vs-Caucasian
1.38480338307545E-11
Normal-vs-AfricanAmerican
1.07590000020252E-07
Normal-vs-Asian
5.8562999999956E-05
Caucasian-vs-AfricanAmerican
2.151200E-01
Caucasian-vs-Asian
5.552200E-01
AfricanAmerican-vs-Asian
7.548800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient gender information is not available for 1 sample.
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Comparison Statistical significance
Normal-vs-Male
5.82960002493138E-09
Normal-vs-Female
3.57689999841426E-08
Male-vs-Female
9.427000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient age information is not available for 1 sample and one sample from patient below 21 years not considered in above plot.
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Comparison Statistical significance
Normal-vs-Age(21-40Yrs)
2.623500E-04
Normal-vs-Age(41-60Yrs)
8.28780000183826E-09
Normal-vs-Age(61-80Yrs)
4.586400E-04
Normal-vs-Age(81-100Yrs)
N/A
Age(21-40Yrs)-vs-Age(41-60Yrs)
8.252400E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
6.460200E-01
Age(21-40Yrs)-vs-Age(81-100Yrs)
N/A
Age(41-60Yrs)-vs-Age(61-80Yrs)
7.439000E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
N/A
Age(61-80Yrs)-vs-Age(81-100Yrs)
N/A
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer in nearby lymph nodes cannot be measured (NX) in 21 samples.
pathologic_N descriptions N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison Statistical significance
Normal-vs-N0
8.43480840728716E-12
Normal-vs-N1
9.757200E-01
Normal-vs-N2
3.58099999999695E-05
N0-vs-N1
1.271510E-02
N0-vs-N2
4.948800E-01
N1-vs-N2
1.889960E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Whole exome sequencing data is not available for 1 sample.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison Statistical significance
Normal-vs-TP53-Mutant
1.236910E-04
Normal-vs-TP53-NonMutant
9.29922805426031E-12
TP53-Mutant-vs-TP53-NonMutant
7.495600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
