COL1A2 expression based on
KICH : Kidney chromophobe
Statistics: Unpaired two sample T-test was employed to evaluate levels of significance in expression level between any two sample groups
Comparison Statistical significance
Normal-vs-Primary 7.305000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer stage information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Stage1
5.863400E-01
Normal-vs-Stage2
1.885160E-01
Normal-vs-Stage3
5.360000E-01
Normal-vs-Stage4
3.739800E-01
Stage1-vs-Stage2
4.111600E-01
Stage1-vs-Stage3
9.749000E-01
Stage1-vs-Stage4
3.549400E-01
Stage2-vs-Stage3
1.705050E-01
Stage2-vs-Stage4
3.378200E-01
Stage3-vs-Stage4
3.553600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient race information is not available for 3 samples.
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Comparison
Statistical significance
Normal-vs-Caucasian
6.585200E-01
Normal-vs-AfricanAmerican
7.388300E-02
Normal-vs-Asian
6.993800E-01
Caucasian-vs-AfricanAmerican
1.263780E-01
Caucasian-vs-Asian
2.086000E-01
AfricanAmerican-vs-Asian
3.034400E-02
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient gender information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Male
4.715200E-01
Normal-vs-Female
1.654250E-01
Male-vs-Female
1.978210E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient age information is not available for 1 sample and one sample from patient below 21 years not considered in above plot.
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Comparison
Statistical significance
Normal-vs-Age(21-40Yrs)
2.788200E-01
Normal-vs-Age(41-60Yrs)
2.385000E-01
Normal-vs-Age(61-80Yrs)
3.397200E-01
Normal-vs-Age(81-100Yrs)
N/A
Age(21-40Yrs)-vs-Age(41-60Yrs)
8.755400E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
2.558800E-01
Age(21-40Yrs)-vs-Age(81-100Yrs)
N/A
Age(41-60Yrs)-vs-Age(61-80Yrs)
2.513000E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
N/A
Age(61-80Yrs)-vs-Age(81-100Yrs)
N/A
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer in nearby lymph nodes cannot be measured (NX) in 21 samples.
pathologic_N descriptions
N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes
N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison
Statistical significance
Normal-vs-N0
1.966040E-01
Normal-vs-N1
8.495200E-01
Normal-vs-N2
6.835800E-01
N0-vs-N1
3.850400E-01
N0-vs-N2
8.961800E-01
N1-vs-N2
4.276600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe
Note
Whole exome sequencing data is not available for 1 sample.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison
Statistical significance
Normal-vs-TP53-Mutant
4.457000E-01
Normal-vs-TP53-NonMutant
4.540400E-01
TP53-Mutant-vs-TP53-NonMutant
3.586000E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap