CALCOCO2 expression based on
KICH : Kidney chromophobe
Comparison Statistical significance
Normal-vs-Primary 1.62447832963153E-12
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer stage information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Stage1
1.41997524849558E-13
Normal-vs-Stage2
5.85753667792233E-13
Normal-vs-Stage3
1.58110000003653E-06
Normal-vs-Stage4
3.00149999998833E-06
Stage1-vs-Stage2
4.431000E-01
Stage1-vs-Stage3
8.577600E-01
Stage1-vs-Stage4
1.084190E-01
Stage2-vs-Stage3
6.606400E-01
Stage2-vs-Stage4
6.483700E-02
Stage3-vs-Stage4
1.918170E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient race information is not available for 3 samples.
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Comparison
Statistical significance
Normal-vs-Caucasian
1.62447832963153E-12
Normal-vs-AfricanAmerican
3.74080000309363E-09
Normal-vs-Asian
2.556200E-04
Caucasian-vs-AfricanAmerican
2.779800E-01
Caucasian-vs-Asian
5.537400E-01
AfricanAmerican-vs-Asian
1.133840E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient gender information is not available for 1 sample.
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Comparison
Statistical significance
Normal-vs-Male
2.05391259555654E-14
Normal-vs-Female
1.62447832963153E-12
Male-vs-Female
1.261810E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Patient age information is not available for 1 sample and one sample from patient below 21 years not considered in above plot.
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Comparison
Statistical significance
Normal-vs-Age(21-40Yrs)
1.65345515057425E-12
Normal-vs-Age(41-60Yrs)
1.62436730732907E-12
Normal-vs-Age(61-80Yrs)
1.50826999999465E-05
Normal-vs-Age(81-100Yrs)
N/A
Age(21-40Yrs)-vs-Age(41-60Yrs)
5.356000E-01
Age(21-40Yrs)-vs-Age(61-80Yrs)
8.003800E-02
Age(21-40Yrs)-vs-Age(81-100Yrs)
N/A
Age(41-60Yrs)-vs-Age(61-80Yrs)
1.639570E-01
Age(41-60Yrs)-vs-Age(81-100Yrs)
N/A
Age(61-80Yrs)-vs-Age(81-100Yrs)
N/A
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe Note
Cancer in nearby lymph nodes cannot be measured (NX) in 21 samples.
pathologic_N descriptions
N0 No regional lymph node metastasis
N1 Metastases in 1 to 3 axillary lymph nodes
N2 Metastases in 4 to 9 axillary lymph nodes
N3 Metastases in 10 or more axillary lymph nodes
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Comparison
Statistical significance
Normal-vs-N0
1.62903024403249E-12
Normal-vs-N1
1.289670E-02
Normal-vs-N2
1.314250E-02
N0-vs-N1
1.309160E-01
N0-vs-N2
3.190000E-01
N1-vs-N2
8.422600E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap
KICH : Kidney chromophobe
Note
Whole exome sequencing data is not available for 1 sample.
TP53 mutation status is obtained from TCGA whole exome sequencing data. We downloaded Mutation Annotation Format (MAF) files (derived from VarScan2) from Genomic Data Commons portal. The sample with/without TP53 mutation were matched with RNA-seq data
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Comparison
Statistical significance
Normal-vs-TP53-Mutant
1.64024349658121E-12
Normal-vs-TP53-NonMutant
<1E-12
TP53-Mutant-vs-TP53-NonMutant
9.148800E-01
Pan-cancer view
Methylation
Survival
Correlated genes
DepMap