SFRP1 promoter methylation profile based on | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
NOTEa
Cancer stage information is not available for 7 samples.
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
NOTEa
Patient race information is not available for 36 samples. Eight samples from American Indians and two samples from Native Hawaiian are not considered in the above plot
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
NOTEa
Height/Weight information is not available for 45 samples, while 12 samples from patients with BMI < 18.5 are not considered in above plot.
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
NOTEa
Grade information is not available for 8 samples and grade cannot be assessed (GX) for 24 samples.
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
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The Beta value indicates level of DNA methylation ranging from 0 (unmethylated) to 1 (fully methylated). Different beta value cut-off has been considered to indicate hyper-methylation [Beta value: 0.7 - 0.5] or hypo-methylation [Beta-value: 0.3 - 0.25]. PMID: 29027401, 23291739 PROBES
CLICK TO SEE PROBE LIST.
Please note that the Beta value is the ratio of the methylated probe intensity and the sum of methylated and unmethylated probe intensity. Beta value ranges from 0 to 1. The above boxplot represents beta values of CpG probes located upto 1500bp upstream of gene's start site [TSS200, TSS1500] *
Please note that low number(<10) of normal samples considered.
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